Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 AC079630.1-202ENST00000618127 1840 ntBASIC21.11■□□□□ 0.97
CLK4Q9HAZ1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 AC011298.3-201ENST00000615796 283 ntBASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK4Q9HAZ1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK4Q9HAZ1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLK4Q9HAZ1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLK4Q9HAZ1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CLK4Q9HAZ1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLK4Q9HAZ1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.08■□□□□ 0.96
CLK4Q9HAZ1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.08■□□□□ 0.96
CLK4Q9HAZ1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLK4Q9HAZ1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 AC242852.2-201ENST00000615738 1807 ntBASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 AC133561.4-201ENST00000566112 224 ntBASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CLK4Q9HAZ1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 UNC93B3-201ENST00000308076 687 ntBASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 MIR3181-201ENST00000578512 73 ntBASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 AL139246.5-201ENST00000606645 996 ntBASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.06■□□□□ 0.96
CLK4Q9HAZ1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms