Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 MIR4466-201ENST00000606121 54 ntBASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRC40Q9H9A6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
LRRC40Q9H9A6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 AC131281.2-201ENST00000520478 145 ntBASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC40Q9H9A6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRRC40Q9H9A6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRRC40Q9H9A6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRRC40Q9H9A6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 AL031602.1-201ENST00000633169 911 ntBASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.14■■□□□ 1.13
LRRC40Q9H9A6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 C11orf96-202ENST00000528572 1834 ntBASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 DUX4L19-201ENST00000557448 1267 ntBASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRRC40Q9H9A6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 OR2I1P-207ENST00000453522 948 ntBASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 AL138724.1-201ENST00000606771 1088 ntBASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 SYT6-210ENST00000641643 1587 ntBASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
LRRC40Q9H9A6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms