Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.52■■□□□ 1.36
CDH23Q9H251 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.52■■□□□ 1.36
CDH23Q9H251 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDH23Q9H251 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.52■■□□□ 1.36
CDH23Q9H251 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.52■■□□□ 1.36
CDH23Q9H251 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDH23Q9H251 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.51■■□□□ 1.35
CDH23Q9H251 ECEL1P3-201ENST00000427961 737 ntBASIC23.51■■□□□ 1.35
CDH23Q9H251 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDH23Q9H251 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.51■■□□□ 1.35
CDH23Q9H251 AC105036.2-201ENST00000569468 176 ntBASIC23.51■■□□□ 1.35
CDH23Q9H251 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.51■■□□□ 1.35
CDH23Q9H251 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.51■■□□□ 1.35
CDH23Q9H251 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDH23Q9H251 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.51■■□□□ 1.35
CDH23Q9H251 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.51■■□□□ 1.35
CDH23Q9H251 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CDH23Q9H251 AC104187.1-201ENST00000607510 612 ntBASIC23.51■■□□□ 1.35
CDH23Q9H251 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.51■■□□□ 1.35
CDH23Q9H251 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDH23Q9H251 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.5■■□□□ 1.35
CDH23Q9H251 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDH23Q9H251 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CDH23Q9H251 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
CDH23Q9H251 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDH23Q9H251 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.5■■□□□ 1.35
CDH23Q9H251 AC133552.2-202ENST00000575694 574 ntBASIC23.5■■□□□ 1.35
CDH23Q9H251 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CDH23Q9H251 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CDH23Q9H251 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDH23Q9H251 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.49■■□□□ 1.35
CDH23Q9H251 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDH23Q9H251 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.49■■□□□ 1.35
CDH23Q9H251 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDH23Q9H251 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDH23Q9H251 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.49■■□□□ 1.35
CDH23Q9H251 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.49■■□□□ 1.35
CDH23Q9H251 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CDH23Q9H251 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDH23Q9H251 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDH23Q9H251 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.49■■□□□ 1.35
CDH23Q9H251 UNC93B4-201ENST00000505679 747 ntBASIC23.49■■□□□ 1.35
CDH23Q9H251 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CDH23Q9H251 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.49■■□□□ 1.35
CDH23Q9H251 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDH23Q9H251 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDH23Q9H251 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDH23Q9H251 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDH23Q9H251 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.48■■□□□ 1.35
CDH23Q9H251 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.48■■□□□ 1.35
CDH23Q9H251 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDH23Q9H251 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.48■■□□□ 1.35
CDH23Q9H251 AC007322.1-201ENST00000426983 750 ntBASIC23.48■■□□□ 1.35
CDH23Q9H251 RARRES2P4-201ENST00000514074 484 ntBASIC23.48■■□□□ 1.35
CDH23Q9H251 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDH23Q9H251 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDH23Q9H251 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.47■■□□□ 1.35
CDH23Q9H251 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDH23Q9H251 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.47■■□□□ 1.35
CDH23Q9H251 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDH23Q9H251 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.47■■□□□ 1.35
CDH23Q9H251 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDH23Q9H251 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 AC008550.1-201ENST00000511500 884 ntBASIC23.46■■□□□ 1.35
CDH23Q9H251 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.46■■□□□ 1.35
CDH23Q9H251 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.46■■□□□ 1.35
CDH23Q9H251 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.46■■□□□ 1.35
CDH23Q9H251 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.46■■□□□ 1.35
CDH23Q9H251 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.46■■□□□ 1.35
CDH23Q9H251 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 AC022211.4-201ENST00000625094 2161 ntBASIC23.46■■□□□ 1.35
CDH23Q9H251 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.46■■□□□ 1.35
CDH23Q9H251 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.46■■□□□ 1.35
CDH23Q9H251 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDH23Q9H251 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CDH23Q9H251 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CDH23Q9H251 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.45■■□□□ 1.34
CDH23Q9H251 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDH23Q9H251 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.45■■□□□ 1.34
CDH23Q9H251 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDH23Q9H251 AC004687.1-201ENST00000579003 1625 ntBASIC23.45■■□□□ 1.34
CDH23Q9H251 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CDH23Q9H251 AC128676.1-201ENST00000454392 318 ntBASIC23.45■■□□□ 1.34
CDH23Q9H251 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CDH23Q9H251 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.45■■□□□ 1.34
CDH23Q9H251 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
CDH23Q9H251 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDH23Q9H251 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDH23Q9H251 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CDH23Q9H251 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.44■■□□□ 1.34
CDH23Q9H251 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
CDH23Q9H251 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CDH23Q9H251 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms