Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
OPN3Q9H1Y3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 TERF1P2-201ENST00000583350 1212 ntBASIC19.27■□□□□ 0.68
OPN3Q9H1Y3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.27■□□□□ 0.67
OPN3Q9H1Y3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.27■□□□□ 0.67
OPN3Q9H1Y3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
OPN3Q9H1Y3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 AC022517.1-201ENST00000592429 346 ntBASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN3Q9H1Y3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 SMUG1P1-201ENST00000590640 811 ntBASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN3Q9H1Y3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 NTF6G-201ENST00000591094 616 ntBASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN3Q9H1Y3 BX005040.4-201ENST00000637145 1518 ntBASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
OPN3Q9H1Y3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms