Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.4■□□□□ 0.54
ALX4Q9H161 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX4Q9H161 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX4Q9H161 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
ALX4Q9H161 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX4Q9H161 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX4Q9H161 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX4Q9H161 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ALX4Q9H161 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.39■□□□□ 0.54
ALX4Q9H161 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ALX4Q9H161 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
ALX4Q9H161 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.39■□□□□ 0.53
ALX4Q9H161 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ALX4Q9H161 YBX1P4-201ENST00000392794 808 ntBASIC18.39■□□□□ 0.53
ALX4Q9H161 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.39■□□□□ 0.53
ALX4Q9H161 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.39■□□□□ 0.53
ALX4Q9H161 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.39■□□□□ 0.53
ALX4Q9H161 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX4Q9H161 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.39■□□□□ 0.53
ALX4Q9H161 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.38■□□□□ 0.53
ALX4Q9H161 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ALX4Q9H161 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ALX4Q9H161 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX4Q9H161 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ALX4Q9H161 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.37■□□□□ 0.53
ALX4Q9H161 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ALX4Q9H161 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ALX4Q9H161 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ALX4Q9H161 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALX4Q9H161 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ALX4Q9H161 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.36■□□□□ 0.53
ALX4Q9H161 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.36■□□□□ 0.53
ALX4Q9H161 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ALX4Q9H161 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX4Q9H161 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.36■□□□□ 0.53
ALX4Q9H161 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ALX4Q9H161 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
ALX4Q9H161 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ALX4Q9H161 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.35■□□□□ 0.53
ALX4Q9H161 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.35■□□□□ 0.53
ALX4Q9H161 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 AC019171.1-201ENST00000601251 1056 ntBASIC18.35■□□□□ 0.53
ALX4Q9H161 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX4Q9H161 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
ALX4Q9H161 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.35■□□□□ 0.53
ALX4Q9H161 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ALX4Q9H161 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
ALX4Q9H161 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.35■□□□□ 0.53
ALX4Q9H161 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ALX4Q9H161 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALX4Q9H161 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 MIR4508-201ENST00000584178 70 ntBASIC18.34■□□□□ 0.53
ALX4Q9H161 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALX4Q9H161 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ALX4Q9H161 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ALX4Q9H161 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
ALX4Q9H161 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms