Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 AC004687.1-201ENST00000579003 1625 ntBASIC22.71■■□□□ 1.23
DDX47Q9H0S4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 MIR6722-201ENST00000617286 78 ntBASIC22.71■■□□□ 1.23
DDX47Q9H0S4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
DDX47Q9H0S4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.7■■□□□ 1.23
DDX47Q9H0S4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
DDX47Q9H0S4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX47Q9H0S4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX47Q9H0S4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.68■■□□□ 1.22
DDX47Q9H0S4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX47Q9H0S4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 AC244015.2-201ENST00000616358 1861 ntBASIC22.67■■□□□ 1.22
DDX47Q9H0S4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX47Q9H0S4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 YBX1P4-201ENST00000392794 808 ntBASIC22.66■■□□□ 1.22
DDX47Q9H0S4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 AL033527.3-201ENST00000566366 1196 ntBASIC22.66■■□□□ 1.22
DDX47Q9H0S4 CA15P2-201ENST00000611168 834 ntBASIC22.66■■□□□ 1.22
DDX47Q9H0S4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX47Q9H0S4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms