Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
HDHD3Q9BSH5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.41■□□□□ 0.54
HDHD3Q9BSH5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDHD3Q9BSH5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.39■□□□□ 0.54
HDHD3Q9BSH5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.39■□□□□ 0.54
HDHD3Q9BSH5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDHD3Q9BSH5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 AC092028.1-203ENST00000608262 953 ntBASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDHD3Q9BSH5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 AL024507.2-201ENST00000606070 2574 ntBASIC18.37■□□□□ 0.53
HDHD3Q9BSH5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.36■□□□□ 0.53
HDHD3Q9BSH5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD3Q9BSH5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms