Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.55■□□□□ 0.88
CPPED1Q9BRF8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPPED1Q9BRF8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPPED1Q9BRF8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.53■□□□□ 0.88
CPPED1Q9BRF8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 AL024507.2-201ENST00000606070 2574 ntBASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 MTDHP2-201ENST00000601468 714 ntBASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPPED1Q9BRF8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.52■□□□□ 0.87
CPPED1Q9BRF8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPPED1Q9BRF8 AC244015.2-201ENST00000616358 1861 ntBASIC20.52■□□□□ 0.87
CPPED1Q9BRF8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.51■□□□□ 0.87
CPPED1Q9BRF8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.5■□□□□ 0.87
CPPED1Q9BRF8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 KRT125P-201ENST00000546827 989 ntBASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPPED1Q9BRF8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 Z92544.1-202ENST00000571933 1220 ntBASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 AL499627.2-201ENST00000606283 725 ntBASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CPPED1Q9BRF8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.47■□□□□ 0.87
CPPED1Q9BRF8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms