Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB40CQ96S21 LINC01529-204ENST00000636474 1715 ntBASIC17.65■□□□□ 0.42
RAB40CQ96S21 AC120024.1-201ENST00000562672 995 ntBASIC17.65■□□□□ 0.42
RAB40CQ96S21 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB40CQ96S21 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB40CQ96S21 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.64■□□□□ 0.42
RAB40CQ96S21 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40CQ96S21 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RAB40CQ96S21 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.64■□□□□ 0.41
RAB40CQ96S21 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RAB40CQ96S21 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40CQ96S21 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40CQ96S21 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40CQ96S21 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB40CQ96S21 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB40CQ96S21 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB40CQ96S21 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40CQ96S21 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
RAB40CQ96S21 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB40CQ96S21 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB40CQ96S21 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 FP325331.1-202ENST00000623531 1380 ntBASIC17.63■□□□□ 0.41
RAB40CQ96S21 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40CQ96S21 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40CQ96S21 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40CQ96S21 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40CQ96S21 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 DUX4L18-201ENST00000553347 1267 ntBASIC17.62■□□□□ 0.41
RAB40CQ96S21 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40CQ96S21 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40CQ96S21 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40CQ96S21 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAB40CQ96S21 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 MIR4281-201ENST00000580852 62 ntBASIC17.6■□□□□ 0.41
RAB40CQ96S21 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 AC009086.3-201ENST00000623486 1008 ntBASIC17.6■□□□□ 0.41
RAB40CQ96S21 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms