Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4LQ96PU5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 AC022616.5-201ENST00000518796 181 ntBASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4LQ96PU5 ALDH1A3-203ENST00000557963 1670 ntBASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 AC139795.1-202ENST00000500444 432 ntBASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NEDD4LQ96PU5 LINC01521-201ENST00000504184 1943 ntBASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4LQ96PU5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4LQ96PU5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 AC131274.2-201ENST00000580697 1507 ntBASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 KRT18P60-201ENST00000312876 1297 ntBASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 HSD17B1P1-201ENST00000590052 955 ntBASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 AC019171.1-201ENST00000601251 1056 ntBASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4LQ96PU5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NEDD4LQ96PU5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NEDD4LQ96PU5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms