Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.93■□□□□ 0.94
CLPTM1LQ96KA5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLPTM1LQ96KA5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLPTM1LQ96KA5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.93■□□□□ 0.94
CLPTM1LQ96KA5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CLPTM1LQ96KA5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLPTM1LQ96KA5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 LONRF2P2-201ENST00000439212 571 ntBASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 AC144652.1-201ENST00000609974 1624 ntBASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLPTM1LQ96KA5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPTM1LQ96KA5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 AL592293.1-201ENST00000502889 1188 ntBASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 LINC01960-201ENST00000563759 1884 ntBASIC20.9■□□□□ 0.94
CLPTM1LQ96KA5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLPTM1LQ96KA5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CLPTM1LQ96KA5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLPTM1LQ96KA5 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPTM1LQ96KA5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPTM1LQ96KA5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPTM1LQ96KA5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms