Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 MIR6722-201ENST00000617286 78 ntBASIC20.74■□□□□ 0.91
LRRC58Q96CX6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.74■□□□□ 0.91
LRRC58Q96CX6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC58Q96CX6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC58Q96CX6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LRRC58Q96CX6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC58Q96CX6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC58Q96CX6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.73■□□□□ 0.91
LRRC58Q96CX6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC58Q96CX6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 AC137630.3-201ENST00000607245 391 ntBASIC20.72■□□□□ 0.91
LRRC58Q96CX6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC58Q96CX6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 AC004687.1-201ENST00000579003 1625 ntBASIC20.71■□□□□ 0.91
LRRC58Q96CX6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LRRC58Q96CX6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRRC58Q96CX6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 AC103834.1-201ENST00000520383 144 ntBASIC20.7■□□□□ 0.9
LRRC58Q96CX6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC58Q96CX6 SLC25A24-204ENST00000569674 2357 ntBASIC20.7■□□□□ 0.9
LRRC58Q96CX6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.69■□□□□ 0.9
LRRC58Q96CX6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC58Q96CX6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC58Q96CX6 AC103724.3-201ENST00000564481 992 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms