Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 AC079834.2-201ENST00000609776 1949 ntBASIC19.28■□□□□ 0.68
TMEM54Q969K7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TMEM54Q969K7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 AC087239.1-201ENST00000622671 572 ntBASIC19.28■□□□□ 0.68
TMEM54Q969K7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM54Q969K7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM54Q969K7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM54Q969K7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TMEM54Q969K7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM54Q969K7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 AC010141.3-201ENST00000456659 717 ntBASIC19.27■□□□□ 0.68
TMEM54Q969K7 AC079089.2-201ENST00000531211 1277 ntBASIC19.27■□□□□ 0.68
TMEM54Q969K7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM54Q969K7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM54Q969K7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM54Q969K7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM54Q969K7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM54Q969K7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM54Q969K7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM54Q969K7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM54Q969K7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 AC233992.3-201ENST00000607491 485 ntBASIC19.26■□□□□ 0.67
TMEM54Q969K7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM54Q969K7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM54Q969K7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM54Q969K7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TMEM54Q969K7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 AC092053.2-201ENST00000640557 1818 ntBASIC19.24■□□□□ 0.67
TMEM54Q969K7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM54Q969K7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM54Q969K7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM54Q969K7 EP400NL-214ENST00000641289 2402 ntBASIC19.23■□□□□ 0.67
TMEM54Q969K7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM54Q969K7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM54Q969K7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM54Q969K7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM54Q969K7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM54Q969K7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM54Q969K7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TMEM54Q969K7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TMEM54Q969K7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms