Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 AC011767.1-201ENST00000617410 1153 ntBASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.9■■■□□ 2.22
RAPGEF4Q8WZA2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
RAPGEF4Q8WZA2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
RAPGEF4Q8WZA2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.89■■■□□ 2.21
RAPGEF4Q8WZA2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RAPGEF4Q8WZA2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.87■■■□□ 2.21
RAPGEF4Q8WZA2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.87■■■□□ 2.21
RAPGEF4Q8WZA2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RAPGEF4Q8WZA2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RAPGEF4Q8WZA2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC28.87■■■□□ 2.21
RAPGEF4Q8WZA2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.87■■■□□ 2.21
RAPGEF4Q8WZA2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RAPGEF4Q8WZA2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.86■■■□□ 2.21
RAPGEF4Q8WZA2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.86■■■□□ 2.21
RAPGEF4Q8WZA2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RAPGEF4Q8WZA2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 AL109923.1-201ENST00000618799 583 ntBASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RAPGEF4Q8WZA2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RAPGEF4Q8WZA2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 NCF1B-203ENST00000435988 1254 ntBASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 DUSP8P3-201ENST00000399571 1760 ntBASIC28.83■■■□□ 2.21
RAPGEF4Q8WZA2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 AL355802.2-201ENST00000402069 882 ntBASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 AC005224.4-201ENST00000583262 1652 ntBASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.82■■■□□ 2.2
RAPGEF4Q8WZA2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 MIR663A-201ENST00000385250 93 ntBASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RAPGEF4Q8WZA2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
RAPGEF4Q8WZA2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RAPGEF4Q8WZA2 AC009237.3-201ENST00000393279 1427 ntBASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms