Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 AL355001.2-201ENST00000620617 1191 ntBASIC22.09■■□□□ 1.13
PTCD2Q8WV60 AL136967.2-201ENST00000623968 743 ntBASIC22.09■■□□□ 1.13
PTCD2Q8WV60 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 ZNRF2P3-201ENST00000424200 374 ntBASIC22.08■■□□□ 1.13
PTCD2Q8WV60 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 CA15P2-201ENST00000611168 834 ntBASIC22.08■■□□□ 1.13
PTCD2Q8WV60 AC011298.3-201ENST00000615796 283 ntBASIC22.08■■□□□ 1.13
PTCD2Q8WV60 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
PTCD2Q8WV60 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PTCD2Q8WV60 AC092053.2-201ENST00000640557 1818 ntBASIC22.08■■□□□ 1.12
PTCD2Q8WV60 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PTCD2Q8WV60 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 AC080038.3-201ENST00000623346 1952 ntBASIC22.07■■□□□ 1.12
PTCD2Q8WV60 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 AL138724.1-201ENST00000606771 1088 ntBASIC22.07■■□□□ 1.12
PTCD2Q8WV60 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.07■■□□□ 1.12
PTCD2Q8WV60 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 MIR939-201ENST00000401314 82 ntBASIC22.06■■□□□ 1.12
PTCD2Q8WV60 AC136469.2-201ENST00000623944 1028 ntBASIC22.06■■□□□ 1.12
PTCD2Q8WV60 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCD2Q8WV60 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCD2Q8WV60 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.05■■□□□ 1.12
PTCD2Q8WV60 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.05■■□□□ 1.12
PTCD2Q8WV60 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 MIR935-201ENST00000401179 91 ntBASIC22.04■■□□□ 1.12
PTCD2Q8WV60 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 CLDN5-201ENST00000403084 2357 ntBASIC22.04■■□□□ 1.12
PTCD2Q8WV60 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCD2Q8WV60 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PTCD2Q8WV60 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCD2Q8WV60 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms