Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCHCR1Q8TD31 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.66■■□□□ 1.22
CCHCR1Q8TD31 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 AC007375.3-201ENST00000600936 2314 ntBASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 AL121603.2-201ENST00000557373 2117 ntBASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 DUX4L4-201ENST00000566884 1269 ntBASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.65■■□□□ 1.22
CCHCR1Q8TD31 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.64■■□□□ 1.22
CCHCR1Q8TD31 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCHCR1Q8TD31 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCHCR1Q8TD31 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 LINC01960-201ENST00000563759 1884 ntBASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.63■■□□□ 1.21
CCHCR1Q8TD31 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCHCR1Q8TD31 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCHCR1Q8TD31 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms