Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.8■■□□□ 1.4
LNX1Q8TBB1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.79■■□□□ 1.4
LNX1Q8TBB1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
LNX1Q8TBB1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LNX1Q8TBB1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 IGHV3-19-201ENST00000521488 291 ntBASIC23.76■■□□□ 1.39
LNX1Q8TBB1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 AC010525.1-201ENST00000585559 441 ntBASIC23.76■■□□□ 1.39
LNX1Q8TBB1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 LINC00526-201ENST00000581067 1875 ntBASIC23.76■■□□□ 1.39
LNX1Q8TBB1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 ECEL1P1-201ENST00000373592 1742 ntBASIC23.76■■□□□ 1.39
LNX1Q8TBB1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.76■■□□□ 1.39
LNX1Q8TBB1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LNX1Q8TBB1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 LINC01529-204ENST00000636474 1715 ntBASIC23.74■■□□□ 1.39
LNX1Q8TBB1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LNX1Q8TBB1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms