Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00304Q8N9R0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00304Q8N9R0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00304Q8N9R0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00304Q8N9R0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00304Q8N9R0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC00304Q8N9R0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00304Q8N9R0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00304Q8N9R0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 IRS3P-201ENST00000223076 1006 ntBASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00304Q8N9R0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 DUSP8P5-201ENST00000422884 1815 ntBASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 ZNRF2P3-201ENST00000424200 374 ntBASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 NFE2L3P1-201ENST00000588207 1959 ntBASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00304Q8N9R0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00304Q8N9R0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 AC010141.3-201ENST00000456659 717 ntBASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 LINC01960-201ENST00000563759 1884 ntBASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00304Q8N9R0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00304Q8N9R0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms