Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH20Q8N6Y1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH20Q8N6Y1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PCDH20Q8N6Y1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDH20Q8N6Y1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDH20Q8N6Y1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 MIR572-201ENST00000384983 95 ntBASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH20Q8N6Y1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 AC087239.1-201ENST00000622671 572 ntBASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH20Q8N6Y1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH20Q8N6Y1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH20Q8N6Y1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 RARRES2P6-201ENST00000567333 442 ntBASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH20Q8N6Y1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 AC010141.3-201ENST00000456659 717 ntBASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 AL358852.1-201ENST00000623174 1268 ntBASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 CLDN5-201ENST00000403084 2357 ntBASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH20Q8N6Y1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCDH20Q8N6Y1 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms