Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf42Q8N5U0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf42Q8N5U0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.1■□□□□ 0.49
C11orf42Q8N5U0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 AC010525.1-201ENST00000585559 441 ntBASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 AC005837.3-201ENST00000612163 286 ntBASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 AL355001.2-201ENST00000620617 1191 ntBASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 AL024507.2-201ENST00000606070 2574 ntBASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.09■□□□□ 0.49
C11orf42Q8N5U0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
C11orf42Q8N5U0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 SLC47A1P1-202ENST00000449666 945 ntBASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
C11orf42Q8N5U0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 BX842568.3-201ENST00000418104 571 ntBASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 AP001330.3-201ENST00000520123 633 ntBASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 AL136967.2-201ENST00000623968 743 ntBASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
C11orf42Q8N5U0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 MIR939-201ENST00000401314 82 ntBASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf42Q8N5U0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 AC233992.3-201ENST00000607491 485 ntBASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf42Q8N5U0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 AF213884.3-201ENST00000563833 479 ntBASIC18.04■□□□□ 0.48
C11orf42Q8N5U0 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms