Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC116Q8IYX3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 UNC93B3-201ENST00000308076 687 ntBASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 AC137767.1-201ENST00000602918 1920 ntBASIC20.55■□□□□ 0.88
CCDC116Q8IYX3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 AC011298.3-201ENST00000615796 283 ntBASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC116Q8IYX3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 AC010525.1-201ENST00000585559 441 ntBASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 AC136469.2-201ENST00000623944 1028 ntBASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 AC139530.1-201ENST00000575312 1977 ntBASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC116Q8IYX3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 OR2I1P-207ENST00000453522 948 ntBASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 CA15P2-201ENST00000611168 834 ntBASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 AL031602.1-201ENST00000633169 911 ntBASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CCDC116Q8IYX3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CCDC116Q8IYX3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC116Q8IYX3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC116Q8IYX3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC116Q8IYX3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC116Q8IYX3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC116Q8IYX3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms