Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 AC004687.1-201ENST00000579003 1625 ntBASIC24.29■■□□□ 1.48
DHX40Q8IX18 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DHX40Q8IX18 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
DHX40Q8IX18 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DHX40Q8IX18 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
DHX40Q8IX18 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.28■■□□□ 1.48
DHX40Q8IX18 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DHX40Q8IX18 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.28■■□□□ 1.48
DHX40Q8IX18 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
DHX40Q8IX18 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DHX40Q8IX18 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DHX40Q8IX18 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DHX40Q8IX18 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
DHX40Q8IX18 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.27■■□□□ 1.48
DHX40Q8IX18 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.27■■□□□ 1.48
DHX40Q8IX18 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
DHX40Q8IX18 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
DHX40Q8IX18 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.27■■□□□ 1.48
DHX40Q8IX18 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
DHX40Q8IX18 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.26■■□□□ 1.47
DHX40Q8IX18 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.26■■□□□ 1.47
DHX40Q8IX18 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.26■■□□□ 1.47
DHX40Q8IX18 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.26■■□□□ 1.47
DHX40Q8IX18 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.26■■□□□ 1.47
DHX40Q8IX18 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.26■■□□□ 1.47
DHX40Q8IX18 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
DHX40Q8IX18 SLC25A24-204ENST00000569674 2357 ntBASIC24.25■■□□□ 1.47
DHX40Q8IX18 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.25■■□□□ 1.47
DHX40Q8IX18 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.25■■□□□ 1.47
DHX40Q8IX18 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DHX40Q8IX18 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DHX40Q8IX18 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.25■■□□□ 1.47
DHX40Q8IX18 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
DHX40Q8IX18 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.25■■□□□ 1.47
DHX40Q8IX18 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
DHX40Q8IX18 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.24■■□□□ 1.47
DHX40Q8IX18 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.24■■□□□ 1.47
DHX40Q8IX18 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.24■■□□□ 1.47
DHX40Q8IX18 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.24■■□□□ 1.47
DHX40Q8IX18 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.24■■□□□ 1.47
DHX40Q8IX18 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DHX40Q8IX18 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DHX40Q8IX18 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
DHX40Q8IX18 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DHX40Q8IX18 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
DHX40Q8IX18 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.23■■□□□ 1.47
DHX40Q8IX18 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
DHX40Q8IX18 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.23■■□□□ 1.47
DHX40Q8IX18 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.23■■□□□ 1.47
DHX40Q8IX18 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.23■■□□□ 1.47
DHX40Q8IX18 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DHX40Q8IX18 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
DHX40Q8IX18 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DHX40Q8IX18 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
DHX40Q8IX18 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DHX40Q8IX18 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.22■■□□□ 1.47
DHX40Q8IX18 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DHX40Q8IX18 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.22■■□□□ 1.47
DHX40Q8IX18 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.22■■□□□ 1.47
DHX40Q8IX18 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DHX40Q8IX18 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
DHX40Q8IX18 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DHX40Q8IX18 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms