Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.033e-6■□□□□ 10
PHF6Q8IWS0 YDJC-207ENST00000482998 1388 ntTSL 521.46■■□□□ 1.033e-6■□□□□ 10
PHF6Q8IWS0 YDJC-203ENST00000415762 1410 ntTSL 1 (best)20.74■□□□□ 0.913e-6■□□□□ 10
PHF6Q8IWS0 YDJC-206ENST00000473985 1494 ntTSL 519.48■□□□□ 0.713e-6■□□□□ 10
PHF6Q8IWS0 YDJC-204ENST00000464015 1613 ntTSL 1 (best)19.22■□□□□ 0.673e-6■□□□□ 10
PHF6Q8IWS0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.05■□□□□ 0.483e-6■□□□□ 10
PHF6Q8IWS0 PRRC2A-203ENST00000460302 697 ntTSL 313.14□□□□□ -0.315e-10■□□□□ 9.9
PHF6Q8IWS0 HSPG2-208ENST00000471322 1602 ntTSL 518.27■□□□□ 0.513e-6■□□□□ 9.9
PHF6Q8IWS0 SNORD13-201ENST00000459299 104 ntBASIC2.32□□□□□ -2.041e-323■□□□□ 9.9
PHF6Q8IWS0 TMC6-220ENST00000591756 475 ntTSL 220.55■□□□□ 0.888e-7■□□□□ 9.9
PHF6Q8IWS0 TMC6-217ENST00000590934 386 ntTSL 512.1□□□□□ -0.478e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.855e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-207ENST00000598681 1358 ntTSL 523.8■■□□□ 1.45e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-204ENST00000595143 810 ntTSL 522.71■■□□□ 1.235e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-202ENST00000594182 303 ntTSL 318.04■□□□□ 0.485e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-205ENST00000597985 656 ntTSL 317.67■□□□□ 0.425e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-212ENST00000600410 4185 ntTSL 215.87■□□□□ 0.135e-7■□□□□ 9.9
PHF6Q8IWS0 SNORD23-201ENST00000408876 110 ntBASIC13.67□□□□□ -0.225e-7■□□□□ 9.9
PHF6Q8IWS0 NOP53-208ENST00000598959 501 ntTSL 512.61□□□□□ -0.395e-7■□□□□ 9.9
PHF6Q8IWS0 FLNA-215ENST00000474358 696 ntTSL 220.28■□□□□ 0.845e-12■□□□□ 9.9
PHF6Q8IWS0 FLNA-209ENST00000444578 843 ntTSL 319.96■□□□□ 0.795e-12■□□□□ 9.9
PHF6Q8IWS0 FLNA-216ENST00000490936 5374 ntTSL 1 (best)15.23■□□□□ 0.035e-12■□□□□ 9.9
PHF6Q8IWS0 FLNA-217ENST00000498411 368 ntTSL 314.89□□□□□ -0.035e-12■□□□□ 9.9
PHF6Q8IWS0 RPL23A-208ENST00000580755 412 ntTSL 220.31■□□□□ 0.842e-12■□□□□ 9.9
PHF6Q8IWS0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.61■□□□□ 0.899e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.159e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-215ENST00000515516 661 ntTSL 515.69■□□□□ 0.19e-8■□□□□ 9.8
PHF6Q8IWS0 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC14.88□□□□□ -0.039e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.159e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.199e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.269e-8■□□□□ 9.8
PHF6Q8IWS0 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC13.09□□□□□ -0.319e-8■□□□□ 9.8
PHF6Q8IWS0 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC13.09□□□□□ -0.319e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-214ENST00000515035 5240 ntTSL 212.62□□□□□ -0.399e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-213ENST00000514442 5195 ntTSL 212.4□□□□□ -0.429e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.539e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.79e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-203ENST00000394269 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.719e-8■□□□□ 9.8
PHF6Q8IWS0 TCOF1-204ENST00000427724 4272 ntAPPRIS ALT2 TSL 510.47□□□□□ -0.739e-8■□□□□ 9.8
PHF6Q8IWS0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.783e-13■□□□□ 9.7
PHF6Q8IWS0 ANKRD9-203ENST00000559404 1502 ntTSL 225.84■■□□□ 1.733e-13■□□□□ 9.7
PHF6Q8IWS0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.713e-13■□□□□ 9.7
PHF6Q8IWS0 ANKRD9-202ENST00000557902 620 ntTSL 325.08■■□□□ 1.613e-13■□□□□ 9.7
PHF6Q8IWS0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.413e-13■□□□□ 9.7
PHF6Q8IWS0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.545e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-220ENST00000616692 2662 ntTSL 1 (best)16.29■□□□□ 0.25e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-216ENST00000492135 1143 ntTSL 1 (best)15.65■□□□□ 0.15e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-206ENST00000466447 1094 ntTSL 213.72□□□□□ -0.215e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-219ENST00000612233 2980 nt13.37□□□□□ -0.275e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-215ENST00000490753 640 ntTSL 211.91□□□□□ -0.55e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-202ENST00000415272 1628 ntTSL 511.86□□□□□ -0.515e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-205ENST00000462630 859 ntTSL 211.51□□□□□ -0.575e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-207ENST00000467196 1320 ntTSL 510.33□□□□□ -0.765e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-211ENST00000471023 592 ntTSL 28.53□□□□□ -1.045e-58■□□□□ 9.7
PHF6Q8IWS0 NOP56-212ENST00000480447 651 ntTSL 27.43□□□□□ -1.225e-58■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-208ENST00000419681 644 ntTSL 518.45■□□□□ 0.542e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.94□□□□□ -0.342e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-217ENST00000492298 591 ntTSL 512.91□□□□□ -0.342e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.34□□□□□ -0.432e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-203ENST00000392017 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.692e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-211ENST00000464645 560 ntTSL 410.62□□□□□ -0.712e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.722e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-215ENST00000479942 3559 ntTSL 1 (best)9.91□□□□□ -0.822e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC9.83□□□□□ -0.842e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-218ENST00000498620 740 ntTSL 59.75□□□□□ -0.852e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-206ENST00000392021 3301 ntTSL 1 (best)9.47□□□□□ -0.892e-43■□□□□ 9.7
PHF6Q8IWS0 ATG16L1-214ENST00000474148 4208 ntTSL 28.82□□□□□ -12e-43■□□□□ 9.7
PHF6Q8IWS0 SCARNA5-201ENST00000516201 276 ntBASIC6.74□□□□□ -1.332e-43■□□□□ 9.7
PHF6Q8IWS0 MT-TF-201ENST00000387314 71 ntBASIC1.91□□□□□ -2.14e-58■□□□□ 9.7
PHF6Q8IWS0 RPSA-204ENST00000458478 874 ntTSL 213.26□□□□□ -0.293e-22■□□□□ 9.7
PHF6Q8IWS0 RPSA-207ENST00000478027 1227 ntTSL 212.71□□□□□ -0.373e-22■□□□□ 9.7
PHF6Q8IWS0 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.383e-22■□□□□ 9.7
PHF6Q8IWS0 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.933e-22■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.358e-6■□□□□ 9.7
PHF6Q8IWS0 NADK-205ENST00000460602 974 ntTSL 229.3■■■□□ 2.288e-6■□□□□ 9.7
PHF6Q8IWS0 NADK-212ENST00000492768 859 ntTSL 327.32■■□□□ 1.968e-6■□□□□ 9.7
PHF6Q8IWS0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.888e-6■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.888e-6■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.858e-6■□□□□ 9.7
PHF6Q8IWS0 SLC2A4RG-203ENST00000474248 624 ntTSL 226.09■■□□□ 1.778e-6■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.738e-6■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.728e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-211ENST00000520019 831 ntTSL 325.6■■□□□ 1.698e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-212ENST00000520134 592 ntTSL 325.6■■□□□ 1.698e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-221ENST00000523108 1080 ntTSL 525.6■■□□□ 1.698e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-208ENST00000519616 522 ntTSL 525.18■■□□□ 1.628e-6■□□□□ 9.7
PHF6Q8IWS0 SLC2A4RG-205ENST00000485897 518 ntTSL 525.15■■□□□ 1.628e-6■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.598e-6■□□□□ 9.7
PHF6Q8IWS0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.448e-6■□□□□ 9.7
PHF6Q8IWS0 AL355987.4-202ENST00000459985 1900 ntTSL 222.19■■□□□ 1.148e-6■□□□□ 9.7
PHF6Q8IWS0 NADK-213ENST00000492845 937 ntTSL 222.07■■□□□ 1.128e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-203ENST00000518168 1013 ntTSL 221.15■□□□□ 0.988e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-215ENST00000559934 2741 ntTSL 1 (best)20.83■□□□□ 0.928e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-218ENST00000560099 2596 ntTSL 219.69■□□□□ 0.748e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.748e-6■□□□□ 9.7
PHF6Q8IWS0 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)18.23■□□□□ 0.518e-6■□□□□ 9.7
PHF6Q8IWS0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.488e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-222ENST00000523329 543 ntTSL 318.02■□□□□ 0.488e-6■□□□□ 9.7
PHF6Q8IWS0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.418e-6■□□□□ 9.7
PHF6Q8IWS0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.98■□□□□ 0.318e-6■□□□□ 9.7
Retrieved 100 of 4,170 protein–RNA pairs in 53 ms