Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 POU5F1P3-201ENST00000428824 1078 ntBASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 ITM2C-210ENST00000620962 501 ntBASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.26■□□□□ 0.51
KRTAP1-3Q8IUG1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 AF201337.1-201ENST00000520239 748 ntBASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.25■□□□□ 0.51
KRTAP1-3Q8IUG1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 PRORSD1P-201ENST00000295112 541 ntBASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 AC133552.2-202ENST00000575694 574 ntBASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 AP003733.4-201ENST00000623785 1697 ntBASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTAP1-3Q8IUG1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 AC105036.2-201ENST00000569468 176 ntBASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 AC022211.4-201ENST00000625094 2161 ntBASIC18.23■□□□□ 0.51
KRTAP1-3Q8IUG1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTAP1-3Q8IUG1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 AP001160.3-201ENST00000601484 763 ntBASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTAP1-3Q8IUG1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
KRTAP1-3Q8IUG1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 AC079630.1-202ENST00000618127 1840 ntBASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTAP1-3Q8IUG1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 RPS2P52-201ENST00000469610 820 ntBASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTAP1-3Q8IUG1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTAP1-3Q8IUG1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KRTAP1-3Q8IUG1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms