Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS13CQ709C8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS13CQ709C8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS13CQ709C8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS13CQ709C8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VPS13CQ709C8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.4■□□□□ 0.54
VPS13CQ709C8 AL596275.1-201ENST00000423464 877 ntBASIC18.4■□□□□ 0.54
VPS13CQ709C8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS13CQ709C8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS13CQ709C8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS13CQ709C8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS13CQ709C8 CNN2P6-201ENST00000439038 900 ntBASIC18.4■□□□□ 0.54
VPS13CQ709C8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS13CQ709C8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VPS13CQ709C8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS13CQ709C8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.39■□□□□ 0.54
VPS13CQ709C8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
VPS13CQ709C8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS13CQ709C8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VPS13CQ709C8 AL353803.4-201ENST00000565882 1934 ntBASIC18.38■□□□□ 0.53
VPS13CQ709C8 DUSP8P5-201ENST00000422884 1815 ntBASIC18.38■□□□□ 0.53
VPS13CQ709C8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS13CQ709C8 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.38■□□□□ 0.53
VPS13CQ709C8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.38■□□□□ 0.53
VPS13CQ709C8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.38■□□□□ 0.53
VPS13CQ709C8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS13CQ709C8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS13CQ709C8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS13CQ709C8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VPS13CQ709C8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS13CQ709C8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS13CQ709C8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS13CQ709C8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS13CQ709C8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 AC083906.2-201ENST00000511578 360 ntBASIC18.37■□□□□ 0.53
VPS13CQ709C8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS13CQ709C8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS13CQ709C8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS13CQ709C8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS13CQ709C8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS13CQ709C8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS13CQ709C8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS13CQ709C8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS13CQ709C8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS13CQ709C8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS13CQ709C8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS13CQ709C8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS13CQ709C8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS13CQ709C8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS13CQ709C8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS13CQ709C8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS13CQ709C8 AC231657.2-201ENST00000624556 255 ntBASIC18.36■□□□□ 0.53
VPS13CQ709C8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS13CQ709C8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS13CQ709C8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS13CQ709C8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS13CQ709C8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS13CQ709C8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VPS13CQ709C8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms