Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 AC131212.1-201ENST00000613771 668 ntBASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRFN4Q6PJG9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 AC004687.1-201ENST00000579003 1625 ntBASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRFN4Q6PJG9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN4Q6PJG9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 MIR3181-201ENST00000578512 73 ntBASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 pRNA.6-201ENST00000610482 90 ntBASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 pRNA.5-201ENST00000612139 90 ntBASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 pRNA.11-201ENST00000618423 90 ntBASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 pRNA.13-201ENST00000619112 90 ntBASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN4Q6PJG9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 ESRRAP2-201ENST00000418437 1549 ntBASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN4Q6PJG9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRFN4Q6PJG9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRFN4Q6PJG9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.52■□□□□ 0.71
LRFN4Q6PJG9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 AC092171.4-201ENST00000609130 632 ntBASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 LINC00526-201ENST00000581067 1875 ntBASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LRFN4Q6PJG9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 LINC00565-201ENST00000562710 2331 ntBASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 AC087742.1-201ENST00000575880 1738 ntBASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 AC133637.1-201ENST00000624115 1537 ntBASIC19.5■□□□□ 0.71
LRFN4Q6PJG9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 AL121603.2-201ENST00000557373 2117 ntBASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 ECEL1P1-201ENST00000373592 1742 ntBASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 AL136116.3-201ENST00000402907 1138 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms