Protein–RNA interactions for Protein: Q6PHR2

ULK3, Serine/threonine-protein kinase ULK3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK3Q6PHR2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ULK3Q6PHR2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ULK3Q6PHR2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 SRD5A1P1-201ENST00000442297 786 ntBASIC19.95■□□□□ 0.78
ULK3Q6PHR2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 AC092171.4-201ENST00000609130 632 ntBASIC19.95■□□□□ 0.78
ULK3Q6PHR2 CA15P2-201ENST00000611168 834 ntBASIC19.95■□□□□ 0.78
ULK3Q6PHR2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ULK3Q6PHR2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 AC137767.1-201ENST00000602918 1920 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 AC133637.1-201ENST00000624115 1537 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 AC006455.2-201ENST00000429931 906 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 pRNA.6-201ENST00000610482 90 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 pRNA.5-201ENST00000612139 90 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 pRNA.11-201ENST00000618423 90 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 pRNA.13-201ENST00000619112 90 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.94■□□□□ 0.78
ULK3Q6PHR2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ULK3Q6PHR2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ULK3Q6PHR2 C11orf96-202ENST00000528572 1834 ntBASIC19.92■□□□□ 0.78
ULK3Q6PHR2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ULK3Q6PHR2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 AL512631.2-201ENST00000604634 923 ntBASIC19.91■□□□□ 0.78
ULK3Q6PHR2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ULK3Q6PHR2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ULK3Q6PHR2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms