Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM53AQ6NSI3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.08■□□□□ 0.49
FAM53AQ6NSI3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
FAM53AQ6NSI3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.08■□□□□ 0.49
FAM53AQ6NSI3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 MIR4466-201ENST00000606121 54 ntBASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 pRNA.6-201ENST00000610482 90 ntBASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 pRNA.5-201ENST00000612139 90 ntBASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 pRNA.11-201ENST00000618423 90 ntBASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 pRNA.13-201ENST00000619112 90 ntBASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM53AQ6NSI3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 AL499627.2-201ENST00000606283 725 ntBASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 AC137767.1-201ENST00000602918 1920 ntBASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM53AQ6NSI3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM53AQ6NSI3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
FAM53AQ6NSI3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 AC007375.3-201ENST00000600936 2314 ntBASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 AC092053.2-201ENST00000640557 1818 ntBASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
FAM53AQ6NSI3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 AC133637.1-201ENST00000624115 1537 ntBASIC18.03■□□□□ 0.48
FAM53AQ6NSI3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FAM53AQ6NSI3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms