Protein–RNA interactions for Protein: Q5VWM6

PRAMEF13, Putative PRAME family member 13, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13Q5VWM6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PRAMEF13Q5VWM6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 AC233992.3-201ENST00000607491 485 ntBASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 CA15P2-201ENST00000611168 834 ntBASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 AC087239.1-201ENST00000622671 572 ntBASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 AL136967.2-201ENST00000623968 743 ntBASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF13Q5VWM6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 AF213884.3-201ENST00000563833 479 ntBASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PRAMEF13Q5VWM6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 GUSBP5-202ENST00000510805 1989 ntBASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 AP001330.3-201ENST00000520123 633 ntBASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF13Q5VWM6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 MIR939-201ENST00000401314 82 ntBASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 AP005435.1-201ENST00000529293 1178 ntBASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 AC027682.1-201ENST00000562846 899 ntBASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 AC008764.7-201ENST00000593779 1081 ntBASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF13Q5VWM6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF13Q5VWM6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF13Q5VWM6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF13Q5VWM6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAMEF13Q5VWM6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF13Q5VWM6 AC137767.1-201ENST00000602918 1920 ntBASIC21.06■□□□□ 0.96
PRAMEF13Q5VWM6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF13Q5VWM6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRAMEF13Q5VWM6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF13Q5VWM6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms