Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATPAF1Q5TC12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ATPAF1Q5TC12 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATPAF1Q5TC12 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATPAF1Q5TC12 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 AC009102.2-201ENST00000606772 1639 ntBASIC18.82■□□□□ 0.6
ATPAF1Q5TC12 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 FBXW4P1-201ENST00000426721 2239 ntBASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATPAF1Q5TC12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATPAF1Q5TC12 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATPAF1Q5TC12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms