Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00242Q5T6M2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 HSD17B1P1-201ENST00000590052 955 ntBASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00242Q5T6M2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 DUX4L4-201ENST00000566884 1269 ntBASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00242Q5T6M2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 AC010980.1-201ENST00000587192 1142 ntBASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 NTF6A-201ENST00000591175 560 ntBASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 AC005703.6-201ENST00000623265 1329 ntBASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00242Q5T6M2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 CA15P2-201ENST00000611168 834 ntBASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms