Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCL20P78556 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL20P78556 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL20P78556 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL20P78556 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCL20P78556 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCL20P78556 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL20P78556 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CCL20P78556 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCL20P78556 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCL20P78556 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCL20P78556 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL20P78556 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL20P78556 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.17■□□□□ 0.34
CCL20P78556 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL20P78556 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
CCL20P78556 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL20P78556 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL20P78556 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CCL20P78556 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CCL20P78556 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL20P78556 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL20P78556 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.16■□□□□ 0.34
CCL20P78556 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.16■□□□□ 0.34
CCL20P78556 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCL20P78556 AC026202.3-201ENST00000600805 1127 ntBASIC17.16■□□□□ 0.34
CCL20P78556 RAP2CP1-202ENST00000605179 643 ntBASIC17.16■□□□□ 0.34
CCL20P78556 CR559946.2-201ENST00000623684 991 ntBASIC17.16■□□□□ 0.34
CCL20P78556 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL20P78556 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL20P78556 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL20P78556 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL20P78556 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL20P78556 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCL20P78556 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCL20P78556 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL20P78556 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCL20P78556 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCL20P78556 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL20P78556 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL20P78556 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL20P78556 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCL20P78556 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CCL20P78556 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCL20P78556 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.14■□□□□ 0.33
CCL20P78556 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL20P78556 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.14■□□□□ 0.33
CCL20P78556 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.14■□□□□ 0.33
CCL20P78556 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CCL20P78556 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL20P78556 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL20P78556 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.14■□□□□ 0.33
CCL20P78556 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL20P78556 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL20P78556 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms