Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTA1P68133 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.42■□□□□ 0.7
ACTA1P68133 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTA1P68133 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTA1P68133 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTA1P68133 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ACTA1P68133 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ACTA1P68133 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ACTA1P68133 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.41■□□□□ 0.7
ACTA1P68133 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.41■□□□□ 0.7
ACTA1P68133 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.41■□□□□ 0.7
ACTA1P68133 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ACTA1P68133 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ACTA1P68133 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTA1P68133 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ACTA1P68133 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTA1P68133 AC244015.2-201ENST00000616358 1861 ntBASIC19.41■□□□□ 0.7
ACTA1P68133 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTA1P68133 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.4■□□□□ 0.7
ACTA1P68133 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 YBX1P4-201ENST00000392794 808 ntBASIC19.4■□□□□ 0.7
ACTA1P68133 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.4■□□□□ 0.7
ACTA1P68133 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.4■□□□□ 0.7
ACTA1P68133 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTA1P68133 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTA1P68133 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ACTA1P68133 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
ACTA1P68133 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACTA1P68133 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACTA1P68133 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACTA1P68133 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACTA1P68133 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACTA1P68133 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.39■□□□□ 0.69
ACTA1P68133 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.39■□□□□ 0.69
ACTA1P68133 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.39■□□□□ 0.69
ACTA1P68133 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.39■□□□□ 0.69
ACTA1P68133 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
ACTA1P68133 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTA1P68133 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTA1P68133 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTA1P68133 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTA1P68133 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.38■□□□□ 0.69
ACTA1P68133 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTA1P68133 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ACTA1P68133 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.38■□□□□ 0.69
ACTA1P68133 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTA1P68133 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.38■□□□□ 0.69
ACTA1P68133 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.38■□□□□ 0.69
ACTA1P68133 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTA1P68133 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.38■□□□□ 0.69
ACTA1P68133 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTA1P68133 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ACTA1P68133 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ACTA1P68133 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 AC004687.1-201ENST00000579003 1625 ntBASIC19.37■□□□□ 0.69
ACTA1P68133 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ACTA1P68133 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.37■□□□□ 0.69
ACTA1P68133 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 AC103724.3-201ENST00000564481 992 ntBASIC19.37■□□□□ 0.69
ACTA1P68133 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ACTA1P68133 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACTA1P68133 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTA1P68133 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.36■□□□□ 0.69
ACTA1P68133 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTA1P68133 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTA1P68133 AC103834.1-201ENST00000520383 144 ntBASIC19.36■□□□□ 0.69
ACTA1P68133 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ACTA1P68133 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTA1P68133 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTA1P68133 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTA1P68133 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms