Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PER3P56645 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.06■□□□□ 0.8
PER3P56645 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
PER3P56645 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.06■□□□□ 0.8
PER3P56645 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PER3P56645 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.05■□□□□ 0.8
PER3P56645 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PER3P56645 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 CCDC92B-201ENST00000575506 885 ntBASIC20.05■□□□□ 0.8
PER3P56645 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PER3P56645 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.05■□□□□ 0.8
PER3P56645 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
PER3P56645 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 LINC02228-203ENST00000641970 1355 ntBASIC20.05■□□□□ 0.8
PER3P56645 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PER3P56645 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.05■□□□□ 0.8
PER3P56645 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.04■□□□□ 0.8
PER3P56645 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.04■□□□□ 0.8
PER3P56645 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.04■□□□□ 0.8
PER3P56645 MIR6084-201ENST00000622012 110 ntBASIC20.04■□□□□ 0.8
PER3P56645 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.04■□□□□ 0.8
PER3P56645 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PER3P56645 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
PER3P56645 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
PER3P56645 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.04■□□□□ 0.8
PER3P56645 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PER3P56645 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.04■□□□□ 0.8
PER3P56645 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.03■□□□□ 0.8
PER3P56645 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.03■□□□□ 0.8
PER3P56645 KRT18P14-201ENST00000534205 1250 ntBASIC20.03■□□□□ 0.8
PER3P56645 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.03■□□□□ 0.8
PER3P56645 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.03■□□□□ 0.8
PER3P56645 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.03■□□□□ 0.8
PER3P56645 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.03■□□□□ 0.8
PER3P56645 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PER3P56645 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PER3P56645 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.02■□□□□ 0.8
PER3P56645 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PER3P56645 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PER3P56645 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
PER3P56645 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.02■□□□□ 0.8
PER3P56645 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.02■□□□□ 0.8
PER3P56645 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PER3P56645 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PER3P56645 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PER3P56645 AC141586.4-201ENST00000624558 1573 ntBASIC20.02■□□□□ 0.8
PER3P56645 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PER3P56645 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PER3P56645 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PER3P56645 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PER3P56645 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PER3P56645 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.01■□□□□ 0.79
PER3P56645 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.01■□□□□ 0.79
PER3P56645 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.01■□□□□ 0.79
PER3P56645 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.01■□□□□ 0.79
PER3P56645 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.01■□□□□ 0.79
PER3P56645 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PER3P56645 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PER3P56645 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PER3P56645 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PER3P56645 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PER3P56645 SLC25A24-204ENST00000569674 2357 ntBASIC20■□□□□ 0.79
PER3P56645 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20■□□□□ 0.79
PER3P56645 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PER3P56645 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PER3P56645 HLA-L-209ENST00000420110 1011 ntBASIC20■□□□□ 0.79
PER3P56645 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20■□□□□ 0.79
PER3P56645 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms