Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.34■□□□□ 0.85
CASP3P42574 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.34■□□□□ 0.85
CASP3P42574 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CASP3P42574 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.34■□□□□ 0.85
CASP3P42574 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.34■□□□□ 0.85
CASP3P42574 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASP3P42574 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.34■□□□□ 0.85
CASP3P42574 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CASP3P42574 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CASP3P42574 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CASP3P42574 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.33■□□□□ 0.85
CASP3P42574 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.33■□□□□ 0.85
CASP3P42574 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.33■□□□□ 0.85
CASP3P42574 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CASP3P42574 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASP3P42574 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASP3P42574 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASP3P42574 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.33■□□□□ 0.84
CASP3P42574 LINC00526-201ENST00000581067 1875 ntBASIC20.33■□□□□ 0.84
CASP3P42574 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.32■□□□□ 0.84
CASP3P42574 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CASP3P42574 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.32■□□□□ 0.84
CASP3P42574 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.32■□□□□ 0.84
CASP3P42574 SUDS3P1-201ENST00000505831 966 ntBASIC20.32■□□□□ 0.84
CASP3P42574 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASP3P42574 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
CASP3P42574 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CASP3P42574 AC127496.7-201ENST00000625110 1798 ntBASIC20.31■□□□□ 0.84
CASP3P42574 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CASP3P42574 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.31■□□□□ 0.84
CASP3P42574 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.31■□□□□ 0.84
CASP3P42574 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.31■□□□□ 0.84
CASP3P42574 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.31■□□□□ 0.84
CASP3P42574 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CASP3P42574 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP3P42574 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CASP3P42574 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.3■□□□□ 0.84
CASP3P42574 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CASP3P42574 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.3■□□□□ 0.84
CASP3P42574 AC142381.2-201ENST00000566120 298 ntBASIC20.3■□□□□ 0.84
CASP3P42574 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.3■□□□□ 0.84
CASP3P42574 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CASP3P42574 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.3■□□□□ 0.84
CASP3P42574 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.3■□□□□ 0.84
CASP3P42574 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASP3P42574 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.3■□□□□ 0.84
CASP3P42574 AC019069.1-201ENST00000610008 1333 ntBASIC20.29■□□□□ 0.84
CASP3P42574 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP3P42574 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP3P42574 AP001330.3-201ENST00000520123 633 ntBASIC20.29■□□□□ 0.84
CASP3P42574 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CASP3P42574 AF213884.3-201ENST00000563833 479 ntBASIC20.29■□□□□ 0.84
CASP3P42574 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP3P42574 AL136967.2-201ENST00000623968 743 ntBASIC20.29■□□□□ 0.84
CASP3P42574 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP3P42574 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP3P42574 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP3P42574 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms