Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC3P40938 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.97■□□□□ 0.79
RFC3P40938 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
RFC3P40938 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RFC3P40938 AC123595.1-201ENST00000440769 1046 ntBASIC19.96■□□□□ 0.79
RFC3P40938 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.96■□□□□ 0.79
RFC3P40938 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC3P40938 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.96■□□□□ 0.79
RFC3P40938 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.96■□□□□ 0.79
RFC3P40938 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC3P40938 IKBKGP1-201ENST00000612193 1073 ntBASIC19.96■□□□□ 0.79
RFC3P40938 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RFC3P40938 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC3P40938 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC3P40938 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC3P40938 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFC3P40938 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC3P40938 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.95■□□□□ 0.78
RFC3P40938 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC3P40938 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.95■□□□□ 0.78
RFC3P40938 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC3P40938 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC3P40938 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC3P40938 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
RFC3P40938 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC3P40938 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC3P40938 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC3P40938 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC3P40938 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC3P40938 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC3P40938 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFC3P40938 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC3P40938 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC3P40938 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RFC3P40938 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.94■□□□□ 0.78
RFC3P40938 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.94■□□□□ 0.78
RFC3P40938 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.94■□□□□ 0.78
RFC3P40938 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.94■□□□□ 0.78
RFC3P40938 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC3P40938 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC3P40938 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC3P40938 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC3P40938 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC3P40938 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFC3P40938 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 KRT18P14-201ENST00000534205 1250 ntBASIC19.93■□□□□ 0.78
RFC3P40938 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.93■□□□□ 0.78
RFC3P40938 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFC3P40938 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.93■□□□□ 0.78
RFC3P40938 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFC3P40938 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC3P40938 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RFC3P40938 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RFC3P40938 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RFC3P40938 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.92■□□□□ 0.78
RFC3P40938 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RFC3P40938 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.92■□□□□ 0.78
RFC3P40938 AC022517.1-201ENST00000592429 346 ntBASIC19.92■□□□□ 0.78
RFC3P40938 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.92■□□□□ 0.78
RFC3P40938 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 LINC02228-203ENST00000641970 1355 ntBASIC19.92■□□□□ 0.78
RFC3P40938 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC3P40938 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC3P40938 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC3P40938 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC3P40938 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RFC3P40938 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC3P40938 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RFC3P40938 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC3P40938 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.91■□□□□ 0.78
RFC3P40938 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.91■□□□□ 0.78
RFC3P40938 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms