Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX6P35712 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX6P35712 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX6P35712 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX6P35712 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.52■□□□□ 0.72
SOX6P35712 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SOX6P35712 ECEL1P2-201ENST00000461596 1295 ntBASIC19.52■□□□□ 0.72
SOX6P35712 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.52■□□□□ 0.72
SOX6P35712 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SOX6P35712 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX6P35712 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
SOX6P35712 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SOX6P35712 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.51■□□□□ 0.71
SOX6P35712 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 AC087742.1-201ENST00000575880 1738 ntBASIC19.51■□□□□ 0.71
SOX6P35712 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SOX6P35712 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 RP9P-202ENST00000450133 1212 ntBASIC19.51■□□□□ 0.71
SOX6P35712 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SOX6P35712 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX6P35712 RNF126P1-201ENST00000567452 1320 ntBASIC19.51■□□□□ 0.71
SOX6P35712 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX6P35712 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX6P35712 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX6P35712 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX6P35712 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX6P35712 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SOX6P35712 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SOX6P35712 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SOX6P35712 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SOX6P35712 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SOX6P35712 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX6P35712 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX6P35712 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX6P35712 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX6P35712 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.5■□□□□ 0.71
SOX6P35712 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
SOX6P35712 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.49■□□□□ 0.71
SOX6P35712 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 AC244015.2-201ENST00000616358 1861 ntBASIC19.49■□□□□ 0.71
SOX6P35712 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.49■□□□□ 0.71
SOX6P35712 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX6P35712 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.49■□□□□ 0.71
SOX6P35712 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SOX6P35712 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.49■□□□□ 0.71
SOX6P35712 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
SOX6P35712 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX6P35712 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.48■□□□□ 0.71
SOX6P35712 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX6P35712 AL353803.4-201ENST00000565882 1934 ntBASIC19.48■□□□□ 0.71
SOX6P35712 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX6P35712 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX6P35712 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SOX6P35712 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SOX6P35712 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SOX6P35712 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX6P35712 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX6P35712 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SOX6P35712 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX6P35712 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX6P35712 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX6P35712 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX6P35712 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX6P35712 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.46■□□□□ 0.71
SOX6P35712 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX6P35712 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.46■□□□□ 0.71
SOX6P35712 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX6P35712 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.46■□□□□ 0.71
SOX6P35712 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms