Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC010542.4-201ENST00000563151 1910 ntBASIC24.73■■□□□ 1.55
CLCN1P35523 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.73■■□□□ 1.55
CLCN1P35523 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN1P35523 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN1P35523 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN1P35523 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN1P35523 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN1P35523 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.72■■□□□ 1.55
CLCN1P35523 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CLCN1P35523 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN1P35523 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN1P35523 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN1P35523 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
CLCN1P35523 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CLCN1P35523 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN1P35523 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CLCN1P35523 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CLCN1P35523 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC24.72■■□□□ 1.55
CLCN1P35523 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN1P35523 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN1P35523 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.71■■□□□ 1.55
CLCN1P35523 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN1P35523 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN1P35523 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC24.71■■□□□ 1.55
CLCN1P35523 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN1P35523 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN1P35523 AC120024.1-201ENST00000562672 995 ntBASIC24.71■■□□□ 1.55
CLCN1P35523 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN1P35523 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.71■■□□□ 1.55
CLCN1P35523 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN1P35523 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CLCN1P35523 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
CLCN1P35523 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
CLCN1P35523 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLCN1P35523 AC103834.1-201ENST00000520383 144 ntBASIC24.7■■□□□ 1.54
CLCN1P35523 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.7■■□□□ 1.54
CLCN1P35523 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CLCN1P35523 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLCN1P35523 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLCN1P35523 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
CLCN1P35523 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CLCN1P35523 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CLCN1P35523 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.69■■□□□ 1.54
CLCN1P35523 MIR4508-201ENST00000584178 70 ntBASIC24.69■■□□□ 1.54
CLCN1P35523 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.69■■□□□ 1.54
CLCN1P35523 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN1P35523 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 AL020996.1-203ENST00000536896 2307 ntBASIC24.68■■□□□ 1.54
CLCN1P35523 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.68■■□□□ 1.54
CLCN1P35523 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.68■■□□□ 1.54
CLCN1P35523 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
CLCN1P35523 KRT18P24-201ENST00000344739 1156 ntBASIC24.68■■□□□ 1.54
CLCN1P35523 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN1P35523 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.67■■□□□ 1.54
CLCN1P35523 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.67■■□□□ 1.54
CLCN1P35523 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.67■■□□□ 1.54
CLCN1P35523 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.67■■□□□ 1.54
CLCN1P35523 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CLCN1P35523 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN1P35523 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN1P35523 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.66■■□□□ 1.54
CLCN1P35523 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN1P35523 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN1P35523 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.66■■□□□ 1.54
CLCN1P35523 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.66■■□□□ 1.54
CLCN1P35523 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.66■■□□□ 1.54
CLCN1P35523 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.66■■□□□ 1.54
CLCN1P35523 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.65■■□□□ 1.54
CLCN1P35523 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.65■■□□□ 1.54
CLCN1P35523 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN1P35523 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms