Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RORAP35398 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RORAP35398 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RORAP35398 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.75■□□□□ 0.91
RORAP35398 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RORAP35398 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.75■□□□□ 0.91
RORAP35398 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RORAP35398 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.75■□□□□ 0.91
RORAP35398 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.75■□□□□ 0.91
RORAP35398 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RORAP35398 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RORAP35398 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.74■□□□□ 0.91
RORAP35398 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RORAP35398 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RORAP35398 KRT18P14-201ENST00000534205 1250 ntBASIC20.74■□□□□ 0.91
RORAP35398 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RORAP35398 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RORAP35398 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RORAP35398 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RORAP35398 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RORAP35398 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RORAP35398 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.73■□□□□ 0.91
RORAP35398 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.73■□□□□ 0.91
RORAP35398 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.73■□□□□ 0.91
RORAP35398 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RORAP35398 AC022517.1-201ENST00000592429 346 ntBASIC20.73■□□□□ 0.91
RORAP35398 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.73■□□□□ 0.91
RORAP35398 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RORAP35398 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.72■□□□□ 0.91
RORAP35398 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.72■□□□□ 0.91
RORAP35398 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RORAP35398 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RORAP35398 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RORAP35398 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RORAP35398 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RORAP35398 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.72■□□□□ 0.91
RORAP35398 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RORAP35398 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.72■□□□□ 0.91
RORAP35398 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.72■□□□□ 0.91
RORAP35398 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.72■□□□□ 0.91
RORAP35398 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RORAP35398 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.72■□□□□ 0.91
RORAP35398 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.72■□□□□ 0.91
RORAP35398 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.72■□□□□ 0.91
RORAP35398 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RORAP35398 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.71■□□□□ 0.91
RORAP35398 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RORAP35398 AC010141.3-201ENST00000456659 717 ntBASIC20.71■□□□□ 0.91
RORAP35398 AC087239.1-201ENST00000622671 572 ntBASIC20.71■□□□□ 0.91
RORAP35398 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.71■□□□□ 0.91
RORAP35398 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.71■□□□□ 0.91
RORAP35398 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RORAP35398 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
RORAP35398 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RORAP35398 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.7■□□□□ 0.9
RORAP35398 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
RORAP35398 TPRG1LP1-201ENST00000598702 760 ntBASIC20.7■□□□□ 0.9
RORAP35398 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.7■□□□□ 0.9
RORAP35398 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RORAP35398 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RORAP35398 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.7■□□□□ 0.9
RORAP35398 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RORAP35398 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.69■□□□□ 0.9
RORAP35398 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.69■□□□□ 0.9
RORAP35398 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RORAP35398 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.69■□□□□ 0.9
RORAP35398 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.69■□□□□ 0.9
RORAP35398 IKBKGP1-201ENST00000612193 1073 ntBASIC20.69■□□□□ 0.9
RORAP35398 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RORAP35398 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms