Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.46■□□□□ 0.55
COL8A2P25067 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL8A2P25067 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.46■□□□□ 0.55
COL8A2P25067 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.46■□□□□ 0.55
COL8A2P25067 AC123595.1-201ENST00000440769 1046 ntBASIC18.46■□□□□ 0.55
COL8A2P25067 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.46■□□□□ 0.55
COL8A2P25067 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.46■□□□□ 0.54
COL8A2P25067 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.45■□□□□ 0.54
COL8A2P25067 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.45■□□□□ 0.54
COL8A2P25067 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.45■□□□□ 0.54
COL8A2P25067 AC010141.3-201ENST00000456659 717 ntBASIC18.45■□□□□ 0.54
COL8A2P25067 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.45■□□□□ 0.54
COL8A2P25067 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.45■□□□□ 0.54
COL8A2P25067 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL8A2P25067 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.45■□□□□ 0.54
COL8A2P25067 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.45■□□□□ 0.54
COL8A2P25067 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL8A2P25067 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.45■□□□□ 0.54
COL8A2P25067 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL8A2P25067 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL8A2P25067 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL8A2P25067 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.44■□□□□ 0.54
COL8A2P25067 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.44■□□□□ 0.54
COL8A2P25067 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.44■□□□□ 0.54
COL8A2P25067 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL8A2P25067 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL8A2P25067 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL8A2P25067 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL8A2P25067 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.43■□□□□ 0.54
COL8A2P25067 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
COL8A2P25067 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.43■□□□□ 0.54
COL8A2P25067 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L2-201ENST00000561772 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
COL8A2P25067 AC087239.1-201ENST00000622671 572 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L6-201ENST00000626483 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L1-201ENST00000627662 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L8-201ENST00000629013 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L3-201ENST00000630187 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L7-201ENST00000630678 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 DUX4L5-201ENST00000630834 1275 ntBASIC18.43■□□□□ 0.54
COL8A2P25067 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.43■□□□□ 0.54
COL8A2P25067 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL8A2P25067 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL8A2P25067 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.42■□□□□ 0.54
COL8A2P25067 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL8A2P25067 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL8A2P25067 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 CCDC92B-201ENST00000575506 885 ntBASIC18.42■□□□□ 0.54
COL8A2P25067 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.42■□□□□ 0.54
COL8A2P25067 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.42■□□□□ 0.54
COL8A2P25067 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.42■□□□□ 0.54
COL8A2P25067 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.42■□□□□ 0.54
COL8A2P25067 DUSP8P3-201ENST00000399571 1760 ntBASIC18.42■□□□□ 0.54
COL8A2P25067 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.42■□□□□ 0.54
COL8A2P25067 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.42■□□□□ 0.54
COL8A2P25067 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL8A2P25067 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.41■□□□□ 0.54
COL8A2P25067 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL8A2P25067 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.41■□□□□ 0.54
COL8A2P25067 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.41■□□□□ 0.54
COL8A2P25067 AC068473.5-201ENST00000616428 2072 ntBASIC18.41■□□□□ 0.54
COL8A2P25067 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COL8A2P25067 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL8A2P25067 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.4■□□□□ 0.54
COL8A2P25067 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms