Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP11P24347 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP11P24347 AP005435.1-201ENST00000529293 1178 ntBASIC20.72■□□□□ 0.91
MMP11P24347 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP11P24347 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP11P24347 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP11P24347 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP11P24347 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP11P24347 AC079630.1-202ENST00000618127 1840 ntBASIC20.71■□□□□ 0.91
MMP11P24347 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP11P24347 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
MMP11P24347 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MMP11P24347 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP11P24347 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.91
MMP11P24347 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.7■□□□□ 0.91
MMP11P24347 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
MMP11P24347 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.7■□□□□ 0.91
MMP11P24347 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP11P24347 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP11P24347 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP11P24347 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP11P24347 YBX1P1-201ENST00000445822 960 ntBASIC20.7■□□□□ 0.9
MMP11P24347 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP11P24347 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MMP11P24347 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP11P24347 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP11P24347 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP11P24347 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP11P24347 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP11P24347 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP11P24347 AL162430.1-201ENST00000480705 870 ntBASIC20.69■□□□□ 0.9
MMP11P24347 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP11P24347 AL354811.1-201ENST00000610286 706 ntBASIC20.69■□□□□ 0.9
MMP11P24347 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.69■□□□□ 0.9
MMP11P24347 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP11P24347 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MMP11P24347 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP11P24347 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP11P24347 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP11P24347 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP11P24347 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MMP11P24347 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MMP11P24347 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
MMP11P24347 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP11P24347 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP11P24347 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP11P24347 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP11P24347 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP11P24347 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP11P24347 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP11P24347 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MMP11P24347 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MMP11P24347 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP11P24347 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MMP11P24347 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP11P24347 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP11P24347 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP11P24347 AC027612.3-201ENST00000413684 1047 ntBASIC20.67■□□□□ 0.9
MMP11P24347 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP11P24347 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
MMP11P24347 AC012414.1-201ENST00000556676 535 ntBASIC20.67■□□□□ 0.9
MMP11P24347 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP11P24347 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP11P24347 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP11P24347 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP11P24347 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP11P24347 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
MMP11P24347 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP11P24347 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP11P24347 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP11P24347 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.66■□□□□ 0.9
MMP11P24347 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP11P24347 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MMP11P24347 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.66■□□□□ 0.9
MMP11P24347 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
MMP11P24347 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
MMP11P24347 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms