Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KRT18P29-201ENST00000397031 1267 ntBASIC27.18■■□□□ 1.94
KCNA3P22001 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.18■■□□□ 1.94
KCNA3P22001 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.18■■□□□ 1.94
KCNA3P22001 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
KCNA3P22001 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
KCNA3P22001 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KCNA3P22001 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KCNA3P22001 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
KCNA3P22001 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC27.17■■□□□ 1.94
KCNA3P22001 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.17■■□□□ 1.94
KCNA3P22001 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
KCNA3P22001 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
KCNA3P22001 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.16■■□□□ 1.94
KCNA3P22001 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.16■■□□□ 1.94
KCNA3P22001 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.16■■□□□ 1.94
KCNA3P22001 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 AC005224.4-201ENST00000583262 1652 ntBASIC27.16■■□□□ 1.94
KCNA3P22001 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
KCNA3P22001 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KCNA3P22001 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
KCNA3P22001 OXCT2P1-201ENST00000447263 1535 ntBASIC27.16■■□□□ 1.94
KCNA3P22001 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
KCNA3P22001 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KCNA3P22001 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
KCNA3P22001 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.14■■□□□ 1.94
KCNA3P22001 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
KCNA3P22001 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.14■■□□□ 1.94
KCNA3P22001 AC098590.1-201ENST00000468126 897 ntBASIC27.14■■□□□ 1.94
KCNA3P22001 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.94
KCNA3P22001 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.14■■□□□ 1.94
KCNA3P22001 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.14■■□□□ 1.94
KCNA3P22001 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNA3P22001 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
KCNA3P22001 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNA3P22001 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
KCNA3P22001 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
KCNA3P22001 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNA3P22001 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.13■■□□□ 1.93
KCNA3P22001 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
KCNA3P22001 AC145676.1-201ENST00000514988 2004 ntBASIC27.12■■□□□ 1.93
KCNA3P22001 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.12■■□□□ 1.93
KCNA3P22001 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
KCNA3P22001 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KCNA3P22001 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.12■■□□□ 1.93
KCNA3P22001 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KCNA3P22001 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.12■■□□□ 1.93
KCNA3P22001 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KCNA3P22001 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.11■■□□□ 1.93
KCNA3P22001 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
KCNA3P22001 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.11■■□□□ 1.93
KCNA3P22001 RNA5SP413-201ENST00000516373 109 ntBASIC27.11■■□□□ 1.93
KCNA3P22001 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
KCNA3P22001 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
KCNA3P22001 AP001160.3-201ENST00000601484 763 ntBASIC27.11■■□□□ 1.93
KCNA3P22001 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.11■■□□□ 1.93
KCNA3P22001 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.11■■□□□ 1.93
KCNA3P22001 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNA3P22001 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.1■■□□□ 1.93
KCNA3P22001 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
KCNA3P22001 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
KCNA3P22001 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
KCNA3P22001 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
KCNA3P22001 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
KCNA3P22001 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KCNA3P22001 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.09■■□□□ 1.93
KCNA3P22001 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
KCNA3P22001 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
KCNA3P22001 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.08■■□□□ 1.93
KCNA3P22001 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.08■■□□□ 1.93
KCNA3P22001 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.08■■□□□ 1.93
KCNA3P22001 SLC7A5P1-201ENST00000568957 537 ntBASIC27.08■■□□□ 1.93
KCNA3P22001 MIR4758-201ENST00000577688 71 ntBASIC27.08■■□□□ 1.93
KCNA3P22001 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.08■■□□□ 1.93
KCNA3P22001 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC27.08■■□□□ 1.93
KCNA3P22001 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
KCNA3P22001 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
KCNA3P22001 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
KCNA3P22001 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
KCNA3P22001 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.07■■□□□ 1.92
KCNA3P22001 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNA3P22001 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNA3P22001 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
KCNA3P22001 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.07■■□□□ 1.92
KCNA3P22001 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNA3P22001 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNA3P22001 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNA3P22001 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms