Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRMP19623 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRMP19623 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRMP19623 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SRMP19623 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
SRMP19623 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRMP19623 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.02■□□□□ 0.64
SRMP19623 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.02■□□□□ 0.64
SRMP19623 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRMP19623 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRMP19623 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRMP19623 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.02■□□□□ 0.63
SRMP19623 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRMP19623 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.02■□□□□ 0.63
SRMP19623 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.01■□□□□ 0.63
SRMP19623 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.01■□□□□ 0.63
SRMP19623 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
SRMP19623 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.01■□□□□ 0.63
SRMP19623 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.01■□□□□ 0.63
SRMP19623 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRMP19623 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SRMP19623 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19■□□□□ 0.63
SRMP19623 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19■□□□□ 0.63
SRMP19623 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19■□□□□ 0.63
SRMP19623 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19■□□□□ 0.63
SRMP19623 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19■□□□□ 0.63
SRMP19623 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SRMP19623 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRMP19623 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRMP19623 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRMP19623 DUX4L4-201ENST00000566884 1269 ntBASIC18.99■□□□□ 0.63
SRMP19623 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.99■□□□□ 0.63
SRMP19623 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
SRMP19623 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.99■□□□□ 0.63
SRMP19623 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SRMP19623 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SRMP19623 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.98■□□□□ 0.63
SRMP19623 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.98■□□□□ 0.63
SRMP19623 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.98■□□□□ 0.63
SRMP19623 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.98■□□□□ 0.63
SRMP19623 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SRMP19623 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRMP19623 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.97■□□□□ 0.63
SRMP19623 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SRMP19623 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.97■□□□□ 0.63
SRMP19623 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SRMP19623 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.97■□□□□ 0.63
SRMP19623 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.97■□□□□ 0.63
SRMP19623 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.97■□□□□ 0.63
SRMP19623 HSD17B1P1-201ENST00000590052 955 ntBASIC18.97■□□□□ 0.63
SRMP19623 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.97■□□□□ 0.63
SRMP19623 CA15P2-201ENST00000611168 834 ntBASIC18.97■□□□□ 0.63
SRMP19623 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SRMP19623 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRMP19623 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SRMP19623 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.96■□□□□ 0.63
SRMP19623 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms