Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.74■□□□□ 0.91
TPRP12270 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.74■□□□□ 0.91
TPRP12270 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.74■□□□□ 0.91
TPRP12270 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.74■□□□□ 0.91
TPRP12270 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.74■□□□□ 0.91
TPRP12270 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TPRP12270 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TPRP12270 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TPRP12270 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.74■□□□□ 0.91
TPRP12270 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.74■□□□□ 0.91
TPRP12270 RN7SL850P-201ENST00000579959 291 ntBASIC20.74■□□□□ 0.91
TPRP12270 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPRP12270 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.73■□□□□ 0.91
TPRP12270 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.73■□□□□ 0.91
TPRP12270 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TPRP12270 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 AP003097.1-201ENST00000530657 1135 ntBASIC20.73■□□□□ 0.91
TPRP12270 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPRP12270 KRT87P-202ENST00000534226 1464 ntBASIC20.72■□□□□ 0.91
TPRP12270 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.72■□□□□ 0.91
TPRP12270 AC079140.4-201ENST00000507448 529 ntBASIC20.72■□□□□ 0.91
TPRP12270 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.72■□□□□ 0.91
TPRP12270 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.72■□□□□ 0.91
TPRP12270 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.72■□□□□ 0.91
TPRP12270 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TPRP12270 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPRP12270 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.72■□□□□ 0.91
TPRP12270 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TPRP12270 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.71■□□□□ 0.91
TPRP12270 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TPRP12270 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.71■□□□□ 0.91
TPRP12270 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPRP12270 AC012618.2-201ENST00000428058 849 ntBASIC20.71■□□□□ 0.91
TPRP12270 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.71■□□□□ 0.91
TPRP12270 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.7■□□□□ 0.91
TPRP12270 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TPRP12270 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 POU5F1P4-201ENST00000413175 1085 ntBASIC20.7■□□□□ 0.9
TPRP12270 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
TPRP12270 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
TPRP12270 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPRP12270 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.7■□□□□ 0.9
TPRP12270 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPRP12270 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.7■□□□□ 0.9
TPRP12270 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPRP12270 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPRP12270 AC096887.2-201ENST00000623443 1957 ntBASIC20.69■□□□□ 0.9
TPRP12270 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.69■□□□□ 0.9
TPRP12270 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.69■□□□□ 0.9
TPRP12270 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.69■□□□□ 0.9
TPRP12270 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.69■□□□□ 0.9
TPRP12270 C2orf69P4-201ENST00000565394 541 ntBASIC20.68■□□□□ 0.9
TPRP12270 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.68■□□□□ 0.9
TPRP12270 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPRP12270 MIPEPP3-201ENST00000412105 444 ntBASIC20.68■□□□□ 0.9
TPRP12270 TMPOP1-202ENST00000424642 1267 ntBASIC20.68■□□□□ 0.9
TPRP12270 AC010536.3-201ENST00000620306 533 ntBASIC20.68■□□□□ 0.9
TPRP12270 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TPRP12270 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TPRP12270 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPRP12270 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPRP12270 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms