Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 PTR3YFR029W 2037 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 BNA1YJR025C 534 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 VPS25YJR102C 609 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 CMC1YKL137W 336 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 UBI4YLL039C 1146 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 SMD3YLR147C 306 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 YLR307C-AYLR307C-A 264 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 YVC1YOR087W 2028 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 USV1YPL230W 1176 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 CCL1YPR025C 1182 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 YBR126W-AYBR126W-A 207 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 ALG1YBR110W 1350 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 TAF12YDR145W 1620 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 ZPR1YGR211W 1461 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 APC1YNL172W 5247 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 ALR2YFL050C 2577 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 APN2YBL019W 1563 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 DHR2YKL078W 2208 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 SPT15YER148W 723 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 RNA15YGL044C 891 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 PRP18YGR006W 756 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 GPP1YIL053W 753 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 YIL165CYIL165C 360 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 COG5YNL051W 1212 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 TMC1YOR052C 453 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 YPR071WYPR071W 636 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 DSS1YMR287C 2910 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 YDR261C-DYDR261C-D 4815 nt4.24□□□□□ -1.73
TY2A-LR1P0C2J4 SAT4YCR008W 1812 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 SAF1YBR280C 1914 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 PEX29YDR479C 1665 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 HRK1YOR267C 2280 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 YDL124WYDL124W 939 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 YDR056CYDR056C 618 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 HAT2YEL056W 1206 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 YGL006W-AYGL006W-A 111 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 PSF3YOL146W 585 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 THI80YOR143C 960 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 YCL021W-AYCL021W-A 378 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 SWP82YFL049W 1872 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 ASK10YGR097W 3441 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 TRM12YML005W 1389 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 ACA1YER045C 1470 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 PRS5YOL061W 1491 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 CEX1YOR112W 2286 nt4.23□□□□□ -1.73
TY2A-LR1P0C2J4 Q0255Q0255 1419 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 NAM2YLR382C 2685 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 EGT2YNL327W 3126 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 YOS1YER074W-A 258 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 ERV29YGR284C 933 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 YHR173CYHR173C 339 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 PIR3YKL163W 978 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 YNL035CYNL035C 1170 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 DCS2YOR173W 1062 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 YOR263CYOR263C 408 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 HSH49YOR319W 642 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 YAR1YPL239W 603 nt4.22□□□□□ -1.73
TY2A-LR1P0C2J4 AIM14YGL160W 1713 nt4.21□□□□□ -1.73
TY2A-LR1P0C2J4 SSH4YKL124W 1740 nt4.21□□□□□ -1.73
TY2A-LR1P0C2J4 BOP2YLR267W 1713 nt4.21□□□□□ -1.73
TY2A-LR1P0C2J4 ADP1YCR011C 3150 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 THS1YIL078W 2205 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 snR7-SsnR7-S 179 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 YDL158CYDL158C 309 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 MEI4YER044C-A 1227 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 YGR111WYGR111W 1203 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 RTA1YGR213C 954 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 ECM34YHL043W 513 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 PFS1YHR185C 714 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 REE1YJL217W 597 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 COS1YNL336W 1146 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 YGK3YOL128C 1128 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 CDC21YOR074C 915 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 ARO4YBR249C 1113 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 NUP2YLR335W 2163 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 MNN4YKL201C 3537 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 OPT2YPR194C 2634 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 PRP43YGL120C 2304 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 YEH2YLR020C 1617 nt4.21□□□□□ -1.74
TY2A-LR1P0C2J4 GIP4YAL031C 2283 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 VID22YLR373C 2706 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 HSP42YDR171W 1128 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 BUD16YEL029C 939 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 RPL34AYER056C-A 366 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 SLX8YER116C 825 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 YIR023C-AYIR023C-A 324 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 PSF2YJL072C 642 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 YAL065CYAL065C 387 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 MED11YMR112C 396 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 RUF21RUF21 707 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 RCL1YOL010W 1104 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 SFG1YOR315W 1041 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 snR44snR44 211 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 SAD1YFR005C 1347 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 SUP45YBR143C 1314 nt4.2□□□□□ -1.74
TY2A-LR1P0C2J4 CET1YPL228W 1650 nt4.19□□□□□ -1.74
TY2A-LR1P0C2J4 PLM2YDR501W 1566 nt4.19□□□□□ -1.74
TY2A-LR1P0C2J4 ART10YLR392C 1557 nt4.19□□□□□ -1.74
TY2A-LR1P0C2J4 YHR202WYHR202W 1809 nt4.19□□□□□ -1.74
TY2A-LR1P0C2J4 RXT3YDL076C 885 nt4.19□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 37 ms