Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPLP0P05388 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.33■■□□□ 1.01
RPLP0P05388 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPLP0P05388 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.33■■□□□ 1.01
RPLP0P05388 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.33■■□□□ 1.01
RPLP0P05388 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPLP0P05388 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPLP0P05388 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RPLP0P05388 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RPLP0P05388 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPLP0P05388 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RPLP0P05388 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.33■■□□□ 1.01
RPLP0P05388 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.33■■□□□ 1.01
RPLP0P05388 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RPLP0P05388 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RPLP0P05388 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RPLP0P05388 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPLP0P05388 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPLP0P05388 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.32■■□□□ 1
RPLP0P05388 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RPLP0P05388 AC004911.1-201ENST00000416316 871 ntBASIC21.32■■□□□ 1
RPLP0P05388 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPLP0P05388 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPLP0P05388 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.32■■□□□ 1
RPLP0P05388 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RPLP0P05388 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.31■■□□□ 1
RPLP0P05388 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.31■■□□□ 1
RPLP0P05388 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.31■■□□□ 1
RPLP0P05388 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.31■■□□□ 1
RPLP0P05388 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.31■■□□□ 1
RPLP0P05388 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
RPLP0P05388 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.31■■□□□ 1
RPLP0P05388 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPLP0P05388 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.3■■□□□ 1
RPLP0P05388 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPLP0P05388 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.3■■□□□ 1
RPLP0P05388 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.3■■□□□ 1
RPLP0P05388 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.3■■□□□ 1
RPLP0P05388 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RPLP0P05388 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.3■■□□□ 1
RPLP0P05388 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.3■■□□□ 1
RPLP0P05388 AC079630.1-202ENST00000618127 1840 ntBASIC21.29■■□□□ 1
RPLP0P05388 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RPLP0P05388 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
RPLP0P05388 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.29■■□□□ 1
RPLP0P05388 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPLP0P05388 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPLP0P05388 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPLP0P05388 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.29■■□□□ 1
RPLP0P05388 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.29■■□□□ 1
RPLP0P05388 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.29■■□□□ 1
RPLP0P05388 AC004687.1-201ENST00000579003 1625 ntBASIC21.29■■□□□ 1
RPLP0P05388 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPLP0P05388 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPLP0P05388 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.28■■□□□ 1
RPLP0P05388 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.28■■□□□ 1
RPLP0P05388 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.28■■□□□ 1
RPLP0P05388 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.28■■□□□ 1
RPLP0P05388 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.28■■□□□ 1
RPLP0P05388 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPLP0P05388 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms