Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND4P03905 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND4P03905 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND4P03905 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND4P03905 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND4P03905 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MT-ND4P03905 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND4P03905 AC092667.1-201ENST00000434301 2586 ntBASIC18.94■□□□□ 0.62
MT-ND4P03905 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.94■□□□□ 0.62
MT-ND4P03905 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.94■□□□□ 0.62
MT-ND4P03905 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MT-ND4P03905 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
MT-ND4P03905 AC103834.1-201ENST00000520383 144 ntBASIC18.93■□□□□ 0.62
MT-ND4P03905 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.93■□□□□ 0.62
MT-ND4P03905 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
MT-ND4P03905 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND4P03905 AC010542.4-201ENST00000563151 1910 ntBASIC18.92■□□□□ 0.62
MT-ND4P03905 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND4P03905 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND4P03905 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND4P03905 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MT-ND4P03905 AC004448.1-201ENST00000458332 883 ntBASIC18.92■□□□□ 0.62
MT-ND4P03905 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.92■□□□□ 0.62
MT-ND4P03905 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND4P03905 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-ND4P03905 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND4P03905 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND4P03905 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.91■□□□□ 0.62
MT-ND4P03905 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND4P03905 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND4P03905 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND4P03905 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND4P03905 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MT-ND4P03905 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND4P03905 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND4P03905 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.9■□□□□ 0.62
MT-ND4P03905 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.9■□□□□ 0.62
MT-ND4P03905 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND4P03905 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.9■□□□□ 0.62
MT-ND4P03905 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
MT-ND4P03905 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MT-ND4P03905 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND4P03905 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND4P03905 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MT-ND4P03905 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.89■□□□□ 0.61
MT-ND4P03905 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND4P03905 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-ND4P03905 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND4P03905 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-ND4P03905 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 YBX1P4-201ENST00000392794 808 ntBASIC18.88■□□□□ 0.61
MT-ND4P03905 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MT-ND4P03905 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-ND4P03905 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-ND4P03905 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MT-ND4P03905 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-ND4P03905 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND4P03905 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND4P03905 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-ND4P03905 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.87■□□□□ 0.61
MT-ND4P03905 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MT-ND4P03905 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND4P03905 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND4P03905 KRT8P33-201ENST00000508125 1423 ntBASIC18.87■□□□□ 0.61
MT-ND4P03905 AC103724.3-201ENST00000564481 992 ntBASIC18.87■□□□□ 0.61
MT-ND4P03905 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
MT-ND4P03905 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND4P03905 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND4P03905 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND4P03905 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND4P03905 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND4P03905 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND4P03905 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND4P03905 AC087742.1-201ENST00000575880 1738 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms