Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN2BO60939 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN2BO60939 MIR6724-1-201ENST00000616420 92 ntBASIC20.7■□□□□ 0.9
SCN2BO60939 MIR6724-2-201ENST00000616483 92 ntBASIC20.7■□□□□ 0.9
SCN2BO60939 MIR6724-4-201ENST00000617390 92 ntBASIC20.7■□□□□ 0.9
SCN2BO60939 MIR6724-3-201ENST00000622482 92 ntBASIC20.7■□□□□ 0.9
SCN2BO60939 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN2BO60939 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN2BO60939 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN2BO60939 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SCN2BO60939 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN2BO60939 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
SCN2BO60939 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN2BO60939 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN2BO60939 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN2BO60939 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN2BO60939 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.68■□□□□ 0.9
SCN2BO60939 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN2BO60939 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN2BO60939 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN2BO60939 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN2BO60939 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN2BO60939 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN2BO60939 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN2BO60939 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SCN2BO60939 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN2BO60939 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.68■□□□□ 0.9
SCN2BO60939 FBXW4P1-201ENST00000426721 2239 ntBASIC20.68■□□□□ 0.9
SCN2BO60939 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN2BO60939 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN2BO60939 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN2BO60939 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN2BO60939 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN2BO60939 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN2BO60939 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN2BO60939 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCN2BO60939 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN2BO60939 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
SCN2BO60939 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN2BO60939 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN2BO60939 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
SCN2BO60939 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN2BO60939 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SCN2BO60939 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SCN2BO60939 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN2BO60939 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN2BO60939 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN2BO60939 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN2BO60939 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN2BO60939 AC010542.4-201ENST00000563151 1910 ntBASIC20.65■□□□□ 0.9
SCN2BO60939 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN2BO60939 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN2BO60939 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCN2BO60939 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.64■□□□□ 0.89
SCN2BO60939 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.64■□□□□ 0.89
SCN2BO60939 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN2BO60939 AL117332.1-201ENST00000622628 974 ntBASIC20.64■□□□□ 0.89
SCN2BO60939 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCN2BO60939 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN2BO60939 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN2BO60939 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN2BO60939 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN2BO60939 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SCN2BO60939 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN2BO60939 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms