Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.3■■□□□ 1
NPHS1O60500 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHS1O60500 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHS1O60500 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NPHS1O60500 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHS1O60500 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.3■■□□□ 1
NPHS1O60500 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHS1O60500 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.3■■□□□ 1
NPHS1O60500 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.3■■□□□ 1
NPHS1O60500 AC244015.2-201ENST00000616358 1861 ntBASIC21.3■■□□□ 1
NPHS1O60500 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.3■■□□□ 1
NPHS1O60500 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
NPHS1O60500 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.29■■□□□ 1
NPHS1O60500 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NPHS1O60500 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.29■■□□□ 1
NPHS1O60500 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NPHS1O60500 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.29■■□□□ 1
NPHS1O60500 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NPHS1O60500 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NPHS1O60500 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.28■■□□□ 1
NPHS1O60500 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.28■■□□□ 1
NPHS1O60500 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.28■■□□□ 1
NPHS1O60500 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.28■■□□□ 1
NPHS1O60500 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.28■■□□□ 1
NPHS1O60500 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.28■■□□□ 1
NPHS1O60500 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
NPHS1O60500 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NPHS1O60500 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPHS1O60500 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.28■■□□□ 1
NPHS1O60500 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPHS1O60500 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPHS1O60500 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.27■■□□□ 1
NPHS1O60500 MTDHP2-201ENST00000601468 714 ntBASIC21.27■■□□□ 1
NPHS1O60500 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPHS1O60500 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.27■■□□□ 1
NPHS1O60500 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPHS1O60500 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NPHS1O60500 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NPHS1O60500 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPHS1O60500 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NPHS1O60500 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NPHS1O60500 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.26■□□□□ 0.99
NPHS1O60500 KRT125P-201ENST00000546827 989 ntBASIC21.26■□□□□ 0.99
NPHS1O60500 Z92544.1-202ENST00000571933 1220 ntBASIC21.26■□□□□ 0.99
NPHS1O60500 AL499627.2-201ENST00000606283 725 ntBASIC21.26■□□□□ 0.99
NPHS1O60500 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.26■□□□□ 0.99
NPHS1O60500 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPHS1O60500 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NPHS1O60500 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NPHS1O60500 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.25■□□□□ 0.99
NPHS1O60500 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.25■□□□□ 0.99
NPHS1O60500 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPHS1O60500 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.25■□□□□ 0.99
NPHS1O60500 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.24■□□□□ 0.99
NPHS1O60500 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPHS1O60500 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NPHS1O60500 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NPHS1O60500 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NPHS1O60500 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPHS1O60500 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPHS1O60500 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.24■□□□□ 0.99
NPHS1O60500 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPHS1O60500 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.24■□□□□ 0.99
NPHS1O60500 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.24■□□□□ 0.99
NPHS1O60500 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPHS1O60500 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPHS1O60500 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NPHS1O60500 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NPHS1O60500 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPHS1O60500 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPHS1O60500 AL024507.2-201ENST00000606070 2574 ntBASIC21.23■□□□□ 0.99
NPHS1O60500 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NPHS1O60500 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.23■□□□□ 0.99
NPHS1O60500 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms