Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.93■□□□□ 0.62
XRCC2O43543 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.93■□□□□ 0.62
XRCC2O43543 MIR3181-201ENST00000578512 73 ntBASIC18.93■□□□□ 0.62
XRCC2O43543 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.93■□□□□ 0.62
XRCC2O43543 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
XRCC2O43543 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
XRCC2O43543 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 EP400NL-214ENST00000641289 2402 ntBASIC18.92■□□□□ 0.62
XRCC2O43543 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.92■□□□□ 0.62
XRCC2O43543 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
XRCC2O43543 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.92■□□□□ 0.62
XRCC2O43543 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.92■□□□□ 0.62
XRCC2O43543 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC2O43543 CA15P2-201ENST00000611168 834 ntBASIC18.92■□□□□ 0.62
XRCC2O43543 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.92■□□□□ 0.62
XRCC2O43543 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
XRCC2O43543 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
XRCC2O43543 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.91■□□□□ 0.62
XRCC2O43543 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
XRCC2O43543 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
XRCC2O43543 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
XRCC2O43543 AC092053.2-201ENST00000640557 1818 ntBASIC18.91■□□□□ 0.62
XRCC2O43543 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 PKD1P6-201ENST00000343738 4769 ntBASIC18.91■□□□□ 0.62
XRCC2O43543 AC131281.2-201ENST00000520478 145 ntBASIC18.91■□□□□ 0.62
XRCC2O43543 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.91■□□□□ 0.62
XRCC2O43543 AL138724.1-201ENST00000606771 1088 ntBASIC18.91■□□□□ 0.62
XRCC2O43543 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
XRCC2O43543 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
XRCC2O43543 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC2O43543 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 SYT6-210ENST00000641643 1587 ntBASIC18.9■□□□□ 0.62
XRCC2O43543 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.9■□□□□ 0.62
XRCC2O43543 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
XRCC2O43543 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 AC080038.3-201ENST00000623346 1952 ntBASIC18.9■□□□□ 0.62
XRCC2O43543 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.9■□□□□ 0.62
XRCC2O43543 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.9■□□□□ 0.62
XRCC2O43543 MIR4466-201ENST00000606121 54 ntBASIC18.9■□□□□ 0.62
XRCC2O43543 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
XRCC2O43543 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.9■□□□□ 0.62
XRCC2O43543 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRCC2O43543 AC139530.1-201ENST00000575312 1977 ntBASIC18.9■□□□□ 0.62
XRCC2O43543 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.9■□□□□ 0.62
XRCC2O43543 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
XRCC2O43543 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRCC2O43543 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.89■□□□□ 0.61
XRCC2O43543 OR2I1P-207ENST00000453522 948 ntBASIC18.89■□□□□ 0.61
XRCC2O43543 AC068587.7-201ENST00000641602 218 ntBASIC18.89■□□□□ 0.61
XRCC2O43543 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRCC2O43543 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRCC2O43543 LINC00565-201ENST00000562710 2331 ntBASIC18.89■□□□□ 0.61
XRCC2O43543 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
XRCC2O43543 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
XRCC2O43543 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.88■□□□□ 0.61
XRCC2O43543 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
XRCC2O43543 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
XRCC2O43543 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.88■□□□□ 0.61
XRCC2O43543 AL031602.1-201ENST00000633169 911 ntBASIC18.88■□□□□ 0.61
XRCC2O43543 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.88■□□□□ 0.61
XRCC2O43543 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.88■□□□□ 0.61
XRCC2O43543 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC2O43543 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
XRCC2O43543 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
XRCC2O43543 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
XRCC2O43543 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC2O43543 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC2O43543 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC2O43543 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.87■□□□□ 0.61
XRCC2O43543 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.87■□□□□ 0.61
XRCC2O43543 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.87■□□□□ 0.61
XRCC2O43543 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC2O43543 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms